Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 MYO15B-237ENST00000642007 4893 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 AL136379.1-201ENST00000623471 2642 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 AC022532.1-201ENST00000624563 1728 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ERCC1P07992 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ERCC1P07992 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.19□□□□□ -0.14
ERCC1P07992 ADH5P3-201ENST00000433842 1137 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.19□□□□□ -0.14
ERCC1P07992 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
ERCC1P07992 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.19□□□□□ -0.14
ERCC1P07992 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.19□□□□□ -0.14
ERCC1P07992 RFPL4AP1-201ENST00000530883 850 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 AC027612.4-201ENST00000605371 583 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 AC009093.7-201ENST00000623853 1223 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 LINC00628-201ENST00000628516 1289 ntBASIC14.19□□□□□ -0.14
ERCC1P07992 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ERCC1P07992 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ERCC1P07992 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.19□□□□□ -0.14
ERCC1P07992 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ERCC1P07992 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ERCC1P07992 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC1P07992 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ERCC1P07992 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ERCC1P07992 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC1P07992 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ERCC1P07992 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC1P07992 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC1P07992 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC1P07992 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.18□□□□□ -0.14
ERCC1P07992 CYMP-203ENST00000474680 1263 ntBASIC14.18□□□□□ -0.14
ERCC1P07992 KRT8P48-201ENST00000515599 1220 ntBASIC14.18□□□□□ -0.14
ERCC1P07992 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
ERCC1P07992 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.18□□□□□ -0.14
ERCC1P07992 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.18□□□□□ -0.14
ERCC1P07992 AC011467.4-201ENST00000594891 528 ntBASIC14.18□□□□□ -0.14
ERCC1P07992 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 AC106028.4-201ENST00000614509 607 ntBASIC14.18□□□□□ -0.14
ERCC1P07992 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
ERCC1P07992 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
ERCC1P07992 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ERCC1P07992 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERCC1P07992 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms