Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 DUX4L27-201ENST00000554796 1261 ntBASIC15.73■□□□□ 0.11
CAPN1P07384 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 AC051619.7-201ENST00000568314 623 ntBASIC15.73■□□□□ 0.11
CAPN1P07384 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN1P07384 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN1P07384 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.73■□□□□ 0.11
CAPN1P07384 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN1P07384 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.73■□□□□ 0.11
CAPN1P07384 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CAPN1P07384 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
CAPN1P07384 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.72■□□□□ 0.11
CAPN1P07384 SPDYE14P-201ENST00000442619 822 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.72■□□□□ 0.11
CAPN1P07384 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 AC067863.1-201ENST00000494933 530 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN1P07384 AC026150.2-201ENST00000564693 1156 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN1P07384 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 AC011467.4-201ENST00000594891 528 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN1P07384 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.72■□□□□ 0.11
CAPN1P07384 AL096865.1-201ENST00000606796 927 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 AL365330.1-201ENST00000607459 531 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 AC008267.7-201ENST00000624570 1194 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CAPN1P07384 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CAPN1P07384 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CAPN1P07384 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CAPN1P07384 UXT-AS1-201ENST00000590504 1525 ntBASIC15.72■□□□□ 0.11
CAPN1P07384 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN1P07384 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN1P07384 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CAPN1P07384 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CAPN1P07384 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CAPN1P07384 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN1P07384 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN1P07384 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPN1P07384 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.71■□□□□ 0.11
CAPN1P07384 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 SLC25A39P2-201ENST00000537614 270 ntBASIC15.71■□□□□ 0.11
CAPN1P07384 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPN1P07384 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPN1P07384 AL138918.1-201ENST00000568306 659 ntBASIC15.71■□□□□ 0.11
CAPN1P07384 AP000842.3-202ENST00000569238 1080 ntBASIC15.71■□□□□ 0.11
CAPN1P07384 AC027307.2-201ENST00000591252 911 ntBASIC15.71■□□□□ 0.11
CAPN1P07384 AC092364.2-202ENST00000597012 1073 ntBASIC15.71■□□□□ 0.11
CAPN1P07384 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.71■□□□□ 0.11
CAPN1P07384 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CAPN1P07384 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPN1P07384 AL589702.1-201ENST00000641229 1509 ntBASIC15.71■□□□□ 0.11
CAPN1P07384 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN1P07384 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms