Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC074338.1-201ENST00000416825 156 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 RN7SL618P-201ENST00000477850 296 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 RFPL4AP1-201ENST00000530883 850 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC025048.3-201ENST00000590609 569 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AL844908.2-201ENST00000609461 460 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC005702.4-201ENST00000618393 416 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC105250.1-201ENST00000509378 2057 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 AC020658.6-201ENST00000623564 1870 ntBASIC16.1■□□□□ 0.17
HLA-DQB2P05538 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HLA-DQB2P05538 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.09■□□□□ 0.17
HLA-DQB2P05538 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.09■□□□□ 0.17
HLA-DQB2P05538 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AL390955.2-201ENST00000603032 514 ntBASIC16.09■□□□□ 0.17
HLA-DQB2P05538 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AL390754.1-201ENST00000619088 582 ntBASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AL590560.3-201ENST00000623350 461 ntBASIC16.09■□□□□ 0.17
HLA-DQB2P05538 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DQB2P05538 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.08■□□□□ 0.17
HLA-DQB2P05538 AC136621.1-201ENST00000624017 2304 ntBASIC16.08■□□□□ 0.17
HLA-DQB2P05538 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.08■□□□□ 0.17
HLA-DQB2P05538 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.08■□□□□ 0.17
HLA-DQB2P05538 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQB2P05538 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.08■□□□□ 0.17
HLA-DQB2P05538 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQB2P05538 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DQB2P05538 AC127383.1-201ENST00000444697 1800 ntBASIC16.08■□□□□ 0.17
HLA-DQB2P05538 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DQB2P05538 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
HLA-DQB2P05538 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms