Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
APOC1P02654 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.16□□□□□ -0.14
APOC1P02654 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
APOC1P02654 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.16□□□□□ -0.14
APOC1P02654 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.16□□□□□ -0.14
APOC1P02654 MED15P5-201ENST00000423150 992 ntBASIC14.16□□□□□ -0.14
APOC1P02654 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC1P02654 AC105233.2-201ENST00000523697 349 ntBASIC14.16□□□□□ -0.14
APOC1P02654 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.16□□□□□ -0.14
APOC1P02654 AF228730.5-201ENST00000530288 346 ntBASIC14.16□□□□□ -0.14
APOC1P02654 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.16□□□□□ -0.14
APOC1P02654 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC1P02654 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.16□□□□□ -0.14
APOC1P02654 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.16□□□□□ -0.14
APOC1P02654 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC1P02654 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.16□□□□□ -0.14
APOC1P02654 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.16□□□□□ -0.14
APOC1P02654 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 AC144831.1-201ENST00000573312 2656 ntBASIC14.16□□□□□ -0.14
APOC1P02654 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 AC010491.1-201ENST00000563101 2797 ntBASIC14.16□□□□□ -0.14
APOC1P02654 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 PAUPAR-201ENST00000630360 2965 ntBASIC14.16□□□□□ -0.14
APOC1P02654 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
APOC1P02654 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.15□□□□□ -0.14
APOC1P02654 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
APOC1P02654 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.15□□□□□ -0.14
APOC1P02654 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
APOC1P02654 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
APOC1P02654 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 KRT18P2-201ENST00000447938 1258 ntBASIC14.15□□□□□ -0.14
APOC1P02654 FDX1P1-201ENST00000449115 551 ntBASIC14.15□□□□□ -0.14
APOC1P02654 KRT18P3-201ENST00000451602 1288 ntBASIC14.15□□□□□ -0.14
APOC1P02654 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 AC098859.1-201ENST00000502915 1238 ntBASIC14.15□□□□□ -0.14
APOC1P02654 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
APOC1P02654 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 AP002472.1-201ENST00000577490 586 ntBASIC14.15□□□□□ -0.14
APOC1P02654 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.15□□□□□ -0.14
APOC1P02654 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.15□□□□□ -0.14
APOC1P02654 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
APOC1P02654 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
APOC1P02654 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
APOC1P02654 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.14□□□□□ -0.15
APOC1P02654 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.14□□□□□ -0.15
APOC1P02654 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.14□□□□□ -0.15
APOC1P02654 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.14□□□□□ -0.15
APOC1P02654 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.14□□□□□ -0.15
APOC1P02654 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.14□□□□□ -0.15
APOC1P02654 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.14□□□□□ -0.15
APOC1P02654 AC106730.1-201ENST00000566722 1090 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms