Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 AC018892.3-201ENST00000623986 2499 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GGPS1O95749 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.79■□□□□ 0.44
GGPS1O95749 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
GGPS1O95749 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GGPS1O95749 AL607033.1-201ENST00000623900 1599 ntBASIC17.79■□□□□ 0.44
GGPS1O95749 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.79■□□□□ 0.44
GGPS1O95749 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GGPS1O95749 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.78■□□□□ 0.44
GGPS1O95749 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GGPS1O95749 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
GGPS1O95749 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GGPS1O95749 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.78■□□□□ 0.44
GGPS1O95749 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.78■□□□□ 0.44
GGPS1O95749 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.78■□□□□ 0.44
GGPS1O95749 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.78■□□□□ 0.44
GGPS1O95749 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.78■□□□□ 0.44
GGPS1O95749 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.78■□□□□ 0.44
GGPS1O95749 RAB43P1-201ENST00000561790 589 ntBASIC17.78■□□□□ 0.44
GGPS1O95749 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.78■□□□□ 0.44
GGPS1O95749 AC017083.2-201ENST00000608069 979 ntBASIC17.78■□□□□ 0.44
GGPS1O95749 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.78■□□□□ 0.44
GGPS1O95749 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.78■□□□□ 0.44
GGPS1O95749 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
GGPS1O95749 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.78■□□□□ 0.44
GGPS1O95749 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GGPS1O95749 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GGPS1O95749 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
GGPS1O95749 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.77■□□□□ 0.44
GGPS1O95749 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
GGPS1O95749 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 AL442647.2-201ENST00000429864 857 ntBASIC17.77■□□□□ 0.44
GGPS1O95749 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.77■□□□□ 0.44
GGPS1O95749 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 AC010319.3-201ENST00000597028 470 ntBASIC17.77■□□□□ 0.44
GGPS1O95749 MIR6752-201ENST00000618442 71 ntBASIC17.77■□□□□ 0.44
GGPS1O95749 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.77■□□□□ 0.44
GGPS1O95749 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.77■□□□□ 0.44
GGPS1O95749 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GGPS1O95749 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
GGPS1O95749 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.77■□□□□ 0.43
GGPS1O95749 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GGPS1O95749 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.77■□□□□ 0.43
GGPS1O95749 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.77■□□□□ 0.43
GGPS1O95749 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GGPS1O95749 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GGPS1O95749 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GGPS1O95749 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GGPS1O95749 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
GGPS1O95749 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms