Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.61■□□□□ 0.25
BEST1O76090 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.61■□□□□ 0.25
BEST1O76090 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.61■□□□□ 0.25
BEST1O76090 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.61■□□□□ 0.25
BEST1O76090 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.61■□□□□ 0.25
BEST1O76090 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.61■□□□□ 0.25
BEST1O76090 AC008494.3-201ENST00000606615 944 ntBASIC16.61■□□□□ 0.25
BEST1O76090 AC025048.6-201ENST00000634326 1161 ntBASIC16.61■□□□□ 0.25
BEST1O76090 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BEST1O76090 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST1O76090 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST1O76090 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.6■□□□□ 0.25
BEST1O76090 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.6■□□□□ 0.25
BEST1O76090 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.6■□□□□ 0.25
BEST1O76090 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
BEST1O76090 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.6■□□□□ 0.25
BEST1O76090 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST1O76090 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.6■□□□□ 0.25
BEST1O76090 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 AL391825.1-201ENST00000457671 1364 ntBASIC16.6■□□□□ 0.25
BEST1O76090 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST1O76090 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST1O76090 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST1O76090 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST1O76090 AC132872.4-202ENST00000622924 2756 ntBASIC16.6■□□□□ 0.25
BEST1O76090 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST1O76090 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 AC007950.2-201ENST00000615045 2347 ntBASIC16.59■□□□□ 0.25
BEST1O76090 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST1O76090 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
BEST1O76090 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST1O76090 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.59■□□□□ 0.25
BEST1O76090 DGCR5-201ENST00000399539 862 ntBASIC16.59■□□□□ 0.25
BEST1O76090 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.59■□□□□ 0.25
BEST1O76090 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
BEST1O76090 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.59■□□□□ 0.25
BEST1O76090 AC140912.1-201ENST00000577171 1054 ntBASIC16.59■□□□□ 0.25
BEST1O76090 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST1O76090 AC099568.2-201ENST00000609194 695 ntBASIC16.59■□□□□ 0.25
BEST1O76090 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.59■□□□□ 0.25
BEST1O76090 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.59■□□□□ 0.25
BEST1O76090 AC007431.3-201ENST00000623221 587 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 861.8 ms