Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.48■□□□□ 0.55
CDKL5O76039 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKL5O76039 AL079307.3-201ENST00000556114 283 ntBASIC18.48■□□□□ 0.55
CDKL5O76039 AC025678.2-201ENST00000562061 970 ntBASIC18.48■□□□□ 0.55
CDKL5O76039 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL5O76039 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKL5O76039 AL589739.1-201ENST00000607720 493 ntBASIC18.48■□□□□ 0.55
CDKL5O76039 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL5O76039 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL5O76039 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 AC022532.1-201ENST00000624563 1728 ntBASIC18.48■□□□□ 0.55
CDKL5O76039 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL5O76039 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKL5O76039 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKL5O76039 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKL5O76039 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL5O76039 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CDKL5O76039 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL5O76039 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDKL5O76039 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL5O76039 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 AC063926.3-201ENST00000624734 5658 ntBASIC18.47■□□□□ 0.55
CDKL5O76039 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CDKL5O76039 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL5O76039 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL5O76039 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CDKL5O76039 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 AC109322.1-201ENST00000524499 1264 ntBASIC18.47■□□□□ 0.55
CDKL5O76039 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL5O76039 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKL5O76039 AC097359.3-201ENST00000603982 1210 ntBASIC18.47■□□□□ 0.55
CDKL5O76039 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL5O76039 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDKL5O76039 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL5O76039 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDKL5O76039 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKL5O76039 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL5O76039 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDKL5O76039 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKL5O76039 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKL5O76039 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 AC105250.1-201ENST00000509378 2057 ntBASIC18.46■□□□□ 0.55
CDKL5O76039 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 TMBIM7P-203ENST00000641617 1718 ntBASIC18.46■□□□□ 0.55
CDKL5O76039 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDKL5O76039 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 AC087481.3-201ENST00000602886 1894 ntBASIC18.46■□□□□ 0.55
CDKL5O76039 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDKL5O76039 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKL5O76039 SERBP1P3-201ENST00000459980 809 ntBASIC18.46■□□□□ 0.55
CDKL5O76039 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.46■□□□□ 0.55
CDKL5O76039 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDKL5O76039 AP001160.2-201ENST00000596071 487 ntBASIC18.46■□□□□ 0.55
CDKL5O76039 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.46■□□□□ 0.55
CDKL5O76039 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL5O76039 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.46■□□□□ 0.55
CDKL5O76039 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKL5O76039 AC092127.1-201ENST00000567093 3455 ntBASIC18.46■□□□□ 0.55
CDKL5O76039 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDKL5O76039 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CDKL5O76039 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CDKL5O76039 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKL5O76039 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDKL5O76039 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDKL5O76039 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDKL5O76039 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.46■□□□□ 0.54
CDKL5O76039 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDKL5O76039 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms