Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
ZNF253O75346 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF253O75346 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF253O75346 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF253O75346 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.47□□□□□ -0.41
ZNF253O75346 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF253O75346 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ZNF253O75346 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZNF253O75346 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZNF253O75346 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF253O75346 AC073621.1-201ENST00000392730 636 ntBASIC12.47□□□□□ -0.41
ZNF253O75346 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
ZNF253O75346 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF253O75346 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.47□□□□□ -0.41
ZNF253O75346 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF253O75346 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZNF253O75346 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF253O75346 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF253O75346 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 AC005622.1-201ENST00000636801 1703 ntBASIC12.47□□□□□ -0.41
ZNF253O75346 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF253O75346 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF253O75346 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF253O75346 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ZNF253O75346 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF253O75346 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF253O75346 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF253O75346 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF253O75346 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
ZNF253O75346 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 MRPL20P1-201ENST00000400819 433 ntBASIC12.46□□□□□ -0.41
ZNF253O75346 PMS2P4-201ENST00000412466 1052 ntBASIC12.46□□□□□ -0.41
ZNF253O75346 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.46□□□□□ -0.41
ZNF253O75346 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.46□□□□□ -0.41
ZNF253O75346 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.46□□□□□ -0.41
ZNF253O75346 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.46□□□□□ -0.41
ZNF253O75346 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 MIR4515-201ENST00000584082 81 ntBASIC12.46□□□□□ -0.41
ZNF253O75346 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF253O75346 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ZNF253O75346 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF253O75346 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms