Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.18□□□□□ -0.14
PFDN1O60925 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PFDN1O60925 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 ID1-201ENST00000376105 1233 ntBASIC14.18□□□□□ -0.14
PFDN1O60925 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.18□□□□□ -0.14
PFDN1O60925 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.18□□□□□ -0.14
PFDN1O60925 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.18□□□□□ -0.14
PFDN1O60925 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PFDN1O60925 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PFDN1O60925 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.18□□□□□ -0.14
PFDN1O60925 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PFDN1O60925 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PFDN1O60925 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
PFDN1O60925 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 AC091390.4-202ENST00000476426 537 ntBASIC14.17□□□□□ -0.14
PFDN1O60925 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 AC092118.2-201ENST00000613495 667 ntBASIC14.17□□□□□ -0.14
PFDN1O60925 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 KRT8P44-201ENST00000441609 1350 ntBASIC14.17□□□□□ -0.14
PFDN1O60925 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PFDN1O60925 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PFDN1O60925 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PFDN1O60925 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PFDN1O60925 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.16□□□□□ -0.14
PFDN1O60925 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PFDN1O60925 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PFDN1O60925 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PFDN1O60925 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PFDN1O60925 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.16□□□□□ -0.14
PFDN1O60925 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PFDN1O60925 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms