Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
DUX1O43812 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.17■□□□□ 0.02
DUX1O43812 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
DUX1O43812 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.17■□□□□ 0.02
DUX1O43812 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.17■□□□□ 0.02
DUX1O43812 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
DUX1O43812 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.17■□□□□ 0.02
DUX1O43812 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.17■□□□□ 0.02
DUX1O43812 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.17■□□□□ 0.02
DUX1O43812 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.17■□□□□ 0.02
DUX1O43812 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX1O43812 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX1O43812 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 MTHFR-217ENST00000641820 1569 ntBASIC15.16■□□□□ 0.02
DUX1O43812 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DUX1O43812 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
DUX1O43812 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DUX1O43812 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DUX1O43812 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 BOLA2P3-201ENST00000404566 256 ntBASIC15.16■□□□□ 0.02
DUX1O43812 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.16■□□□□ 0.02
DUX1O43812 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX1O43812 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX1O43812 RPS2P32-201ENST00000439199 892 ntBASIC15.16■□□□□ 0.02
DUX1O43812 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
DUX1O43812 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX1O43812 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX1O43812 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX1O43812 ENPP7P5-201ENST00000541031 1031 ntBASIC15.16■□□□□ 0.02
DUX1O43812 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX1O43812 AL359711.2-201ENST00000563105 872 ntBASIC15.16■□□□□ 0.02
DUX1O43812 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.16■□□□□ 0.02
DUX1O43812 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.16■□□□□ 0.02
DUX1O43812 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.16■□□□□ 0.02
DUX1O43812 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DUX1O43812 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DUX1O43812 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 PCDHA12-202ENST00000613593 2588 ntBASIC15.16■□□□□ 0.02
DUX1O43812 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX1O43812 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX1O43812 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms