Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SEMA3EO15041 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3EO15041 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19■□□□□ 0.63
SEMA3EO15041 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19■□□□□ 0.63
SEMA3EO15041 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19■□□□□ 0.63
SEMA3EO15041 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19■□□□□ 0.63
SEMA3EO15041 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3EO15041 AC093813.1-201ENST00000605066 256 ntBASIC19■□□□□ 0.63
SEMA3EO15041 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3EO15041 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SEMA3EO15041 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 AC018695.7-201ENST00000624587 2492 ntBASIC19■□□□□ 0.63
SEMA3EO15041 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 OR6D1P-203ENST00000641209 4860 ntBASIC19■□□□□ 0.63
SEMA3EO15041 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19■□□□□ 0.63
SEMA3EO15041 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3EO15041 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19■□□□□ 0.63
SEMA3EO15041 DRD5P1-201ENST00000456605 1438 ntBASIC19■□□□□ 0.63
SEMA3EO15041 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19■□□□□ 0.63
SEMA3EO15041 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA3EO15041 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SEMA3EO15041 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA3EO15041 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SEMA3EO15041 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
SEMA3EO15041 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA3EO15041 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3EO15041 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 HCG24-202ENST00000414398 717 ntTSL 3 BASIC18.99■□□□□ 0.63
SEMA3EO15041 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3EO15041 KRT43P-201ENST00000434019 910 ntBASIC18.99■□□□□ 0.63
SEMA3EO15041 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.99■□□□□ 0.63
SEMA3EO15041 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.99■□□□□ 0.63
SEMA3EO15041 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3EO15041 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.99■□□□□ 0.63
SEMA3EO15041 GAPDHP40-201ENST00000505218 1006 ntBASIC18.99■□□□□ 0.63
SEMA3EO15041 SLC25A47P1-201ENST00000531577 414 ntBASIC18.99■□□□□ 0.63
SEMA3EO15041 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.99■□□□□ 0.63
SEMA3EO15041 AC009486.1-201ENST00000569860 813 ntBASIC18.99■□□□□ 0.63
SEMA3EO15041 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SEMA3EO15041 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3EO15041 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.99■□□□□ 0.63
SEMA3EO15041 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3EO15041 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA3EO15041 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.99■□□□□ 0.63
SEMA3EO15041 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SEMA3EO15041 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.99■□□□□ 0.63
SEMA3EO15041 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA3EO15041 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA3EO15041 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SEMA3EO15041 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA3EO15041 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SEMA3EO15041 DOC2GP-204ENST00000639052 2548 ntBASIC18.98■□□□□ 0.63
SEMA3EO15041 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.98■□□□□ 0.63
SEMA3EO15041 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SEMA3EO15041 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 AC022210.1-201ENST00000449856 793 ntBASIC18.98■□□□□ 0.63
SEMA3EO15041 TDH-203ENST00000531764 1110 ntBASIC18.98■□□□□ 0.63
SEMA3EO15041 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA3EO15041 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.98■□□□□ 0.63
SEMA3EO15041 CLUHP6-201ENST00000580789 941 ntBASIC18.98■□□□□ 0.63
SEMA3EO15041 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.98■□□□□ 0.63
SEMA3EO15041 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SEMA3EO15041 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SEMA3EO15041 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.98■□□□□ 0.63
SEMA3EO15041 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SEMA3EO15041 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
SEMA3EO15041 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SEMA3EO15041 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SEMA3EO15041 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEMA3EO15041 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.97■□□□□ 0.63
SEMA3EO15041 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEMA3EO15041 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms