Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC21.52■■□□□ 1.04
CHD2O14647 RPS15-205ENST00000586686 562 ntTSL 5 BASIC21.52■■□□□ 1.04
CHD2O14647 RPS15-208ENST00000591804 711 ntTSL 5 BASIC21.52■■□□□ 1.04
CHD2O14647 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 AC009955.4-201ENST00000597192 544 ntBASIC21.52■■□□□ 1.04
CHD2O14647 AC004466.1-201ENST00000599515 1080 ntBASIC21.52■■□□□ 1.04
CHD2O14647 AC073352.2-201ENST00000609385 439 ntBASIC21.52■■□□□ 1.04
CHD2O14647 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC21.52■■□□□ 1.04
CHD2O14647 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 RN7SKP175-201ENST00000408472 289 ntBASIC21.52■■□□□ 1.04
CHD2O14647 KRT18P66-201ENST00000452970 1269 ntBASIC21.52■■□□□ 1.04
CHD2O14647 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC21.52■■□□□ 1.04
CHD2O14647 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC21.52■■□□□ 1.04
CHD2O14647 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHD2O14647 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC21.52■■□□□ 1.04
CHD2O14647 AL358472.3-201ENST00000608147 415 ntBASIC21.52■■□□□ 1.04
CHD2O14647 MIR6756-201ENST00000616240 63 ntBASIC21.52■■□□□ 1.04
CHD2O14647 AC138466.3-201ENST00000619983 221 ntBASIC21.52■■□□□ 1.04
CHD2O14647 COX6A1P2-201ENST00000620597 330 ntBASIC21.52■■□□□ 1.04
CHD2O14647 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD2O14647 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CHD2O14647 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHD2O14647 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD2O14647 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD2O14647 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC21.51■■□□□ 1.03
CHD2O14647 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.51■■□□□ 1.03
CHD2O14647 AL353770.1-201ENST00000614915 403 ntBASIC21.51■■□□□ 1.03
CHD2O14647 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CHD2O14647 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHD2O14647 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC21.51■■□□□ 1.03
CHD2O14647 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD2O14647 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CHD2O14647 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD2O14647 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CHD2O14647 AC026471.1-201ENST00000564629 3026 ntBASIC21.5■■□□□ 1.03
CHD2O14647 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD2O14647 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD2O14647 WDR7-208ENST00000589935 544 ntTSL 4 BASIC21.5■■□□□ 1.03
CHD2O14647 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD2O14647 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CHD2O14647 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHD2O14647 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CHD2O14647 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 AC011477.6-201ENST00000604980 1927 ntBASIC21.5■■□□□ 1.03
CHD2O14647 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CHD2O14647 AC026316.1-201ENST00000398900 414 ntBASIC21.5■■□□□ 1.03
CHD2O14647 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD2O14647 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD2O14647 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 DUX4L47-201ENST00000566374 394 ntBASIC21.5■■□□□ 1.03
CHD2O14647 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD2O14647 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHD2O14647 AC020922.3-201ENST00000595064 547 ntBASIC21.5■■□□□ 1.03
CHD2O14647 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD2O14647 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHD2O14647 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD2O14647 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD2O14647 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CHD2O14647 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CHD2O14647 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 RPL13AP19-201ENST00000434320 584 ntBASIC21.49■■□□□ 1.03
CHD2O14647 IGLV3-15-201ENST00000518356 244 ntBASIC21.49■■□□□ 1.03
CHD2O14647 AC009779.1-201ENST00000551138 283 ntBASIC21.49■■□□□ 1.03
CHD2O14647 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHD2O14647 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms