Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
UPK2O00526 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK2O00526 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK2O00526 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
UPK2O00526 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK2O00526 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK2O00526 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UPK2O00526 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK2O00526 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK2O00526 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 MIR346-201ENST00000362234 95 ntBASIC12.79□□□□□ -0.36
UPK2O00526 HLA-H-201ENST00000383620 1096 ntBASIC12.79□□□□□ -0.36
UPK2O00526 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UPK2O00526 AC023274.1-201ENST00000418278 595 ntBASIC12.79□□□□□ -0.36
UPK2O00526 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.79□□□□□ -0.36
UPK2O00526 SPDYE11-202ENST00000450699 704 ntBASIC12.79□□□□□ -0.36
UPK2O00526 AC243562.1-201ENST00000560672 389 ntBASIC12.79□□□□□ -0.36
UPK2O00526 AP000842.3-202ENST00000569238 1080 ntBASIC12.79□□□□□ -0.36
UPK2O00526 SPDYE9P-201ENST00000570642 692 ntBASIC12.79□□□□□ -0.36
UPK2O00526 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK2O00526 AC026120.1-201ENST00000611536 926 ntBASIC12.79□□□□□ -0.36
UPK2O00526 SPDYE10P-202ENST00000612005 668 ntBASIC12.79□□□□□ -0.36
UPK2O00526 SPDYE8P-202ENST00000612377 668 ntBASIC12.79□□□□□ -0.36
UPK2O00526 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK2O00526 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
UPK2O00526 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UPK2O00526 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
UPK2O00526 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK2O00526 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK2O00526 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UPK2O00526 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UPK2O00526 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK2O00526 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK2O00526 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UPK2O00526 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.78□□□□□ -0.36
UPK2O00526 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 MIR600HG-201ENST00000449175 5984 ntBASIC12.78□□□□□ -0.36
UPK2O00526 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
UPK2O00526 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UPK2O00526 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 AL139010.1-201ENST00000454878 894 ntBASIC12.78□□□□□ -0.36
UPK2O00526 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK2O00526 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.78□□□□□ -0.36
UPK2O00526 IGHV3-62-201ENST00000520057 340 ntBASIC12.78□□□□□ -0.36
UPK2O00526 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
UPK2O00526 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.78□□□□□ -0.36
UPK2O00526 KRT8P23-201ENST00000560090 1207 ntBASIC12.78□□□□□ -0.36
UPK2O00526 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 AL450472.2-201ENST00000603663 1156 ntBASIC12.78□□□□□ -0.36
UPK2O00526 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.78□□□□□ -0.36
UPK2O00526 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
UPK2O00526 AL136982.4-201ENST00000437689 1740 ntBASIC12.78□□□□□ -0.36
UPK2O00526 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK2O00526 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms