Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC66A2RUB6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.34■□□□□ 0.37
CCDC66A2RUB6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 AC073648.2-201ENST00000510116 352 ntBASIC17.34■□□□□ 0.37
CCDC66A2RUB6 IGHV3-65-201ENST00000523210 341 ntBASIC17.34■□□□□ 0.37
CCDC66A2RUB6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCDC66A2RUB6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.33■□□□□ 0.37
CCDC66A2RUB6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC66A2RUB6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 RPS2P1-201ENST00000434010 821 ntBASIC17.33■□□□□ 0.36
CCDC66A2RUB6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 MIR1199-201ENST00000621445 119 ntBASIC17.33■□□□□ 0.36
CCDC66A2RUB6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.33■□□□□ 0.36
CCDC66A2RUB6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC66A2RUB6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms