Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MIR4745-201ENST00000577608 62 ntBASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MIR4453-201ENST00000584019 89 ntBASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL390754.1-201ENST00000619088 582 ntBASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AJ011932.1-201ENST00000621707 465 ntBASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.85□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PRAL-201ENST00000624952 3286 ntBASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.84□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RARRES2P9-201ENST00000565168 469 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms