Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 AZGP1P1-201ENST00000411909 902 ntBASIC18.15■□□□□ 0.5
CLIC4Q9Y696 AL627223.1-201ENST00000416693 442 ntBASIC18.15■□□□□ 0.5
CLIC4Q9Y696 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 AC055717.3-201ENST00000622967 595 ntBASIC18.15■□□□□ 0.5
CLIC4Q9Y696 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLIC4Q9Y696 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLIC4Q9Y696 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLIC4Q9Y696 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
CLIC4Q9Y696 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLIC4Q9Y696 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CLIC4Q9Y696 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CLIC4Q9Y696 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.14■□□□□ 0.5
CLIC4Q9Y696 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 KRT18P32-201ENST00000424695 1287 ntBASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC105021.1-202ENST00000570572 669 ntBASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC010327.4-202ENST00000591484 748 ntBASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC026979.3-201ENST00000607315 403 ntBASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 AC006058.4-201ENST00000624016 1670 ntBASIC18.14■□□□□ 0.49
CLIC4Q9Y696 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLIC4Q9Y696 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC4Q9Y696 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC4Q9Y696 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC4Q9Y696 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIC4Q9Y696 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIC4Q9Y696 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms