Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAPPC1Q9Y5R8 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AC092135.3-201ENST00000624151 1846 ntBASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAPPC1Q9Y5R8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAPPC1Q9Y5R8 KLF4P1-201ENST00000412782 1185 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms