Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB4Q9UN71 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 AL109954.1-202ENST00000564051 2148 ntBASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 AL031284.1-201ENST00000419297 478 ntBASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 VN2R19P-201ENST00000442399 1052 ntBASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 AC079781.3-201ENST00000449110 356 ntBASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB4Q9UN71 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 AP003680.1-201ENST00000598970 3660 ntBASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB4Q9UN71 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 AC005089.1-201ENST00000619486 2241 ntBASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGB4Q9UN71 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms