Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AC243562.1-201ENST00000560672 389 ntBASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 SPDYE9P-201ENST00000570642 692 ntBASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 SPDYE10P-202ENST00000612005 668 ntBASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 SPDYE8P-202ENST00000612377 668 ntBASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AC009093.7-201ENST00000623853 1223 ntBASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 AC099063.4-201ENST00000641099 1602 ntBASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.41■□□□□ 0.22
RABGEF1Q9UJ41 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 TFAMP1-201ENST00000412727 736 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 AL691447.1-201ENST00000419456 387 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 AC079140.1-201ENST00000508039 487 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 SPCS2P1-201ENST00000561636 679 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 AC025678.2-201ENST00000562061 970 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 AC011467.4-201ENST00000594891 528 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 AC092364.2-202ENST00000597012 1073 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RABGEF1Q9UJ41 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RABGEF1Q9UJ41 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RABGEF1Q9UJ41 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.39■□□□□ 0.21
RABGEF1Q9UJ41 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms