Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
RIMBP3Q9UFD9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 AC010900.1-201ENST00000449849 1296 ntBASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 EMC4-208ENST00000559078 599 ntTSL 3 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 AC004466.1-201ENST00000599515 1080 ntBASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RIMBP3Q9UFD9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 RPL14-203ENST00000416518 812 ntTSL 3 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 DUTP3-201ENST00000450025 415 ntBASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC24.39■■□□□ 1.49
RIMBP3Q9UFD9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 KLF2P1-201ENST00000447438 1042 ntBASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 AC093752.3-201ENST00000567343 901 ntBASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 RN7SL470P-201ENST00000583069 259 ntBASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 Z98259.2-201ENST00000641583 609 ntBASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 SLC25A24-204ENST00000569674 2357 ntBASIC24.38■■□□□ 1.49
RIMBP3Q9UFD9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 KRT17P5-201ENST00000332088 839 ntBASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 SURF4-203ENST00000371991 715 ntTSL 3 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RIMBP3Q9UFD9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 AC011462.4-201ENST00000616866 449 ntBASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 LINC01815-202ENST00000641468 1409 ntBASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
RIMBP3Q9UFD9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 FAM58BP-201ENST00000439056 645 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AC026470.1-201ENST00000478038 846 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AC083801.1-201ENST00000491689 358 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms