Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 AC099568.2-201ENST00000609194 695 ntBASIC14.62□□□□□ -0.07
LRFN1Q9P244 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRFN1Q9P244 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
LRFN1Q9P244 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 MYCLP2-201ENST00000449268 967 ntBASIC14.61□□□□□ -0.07
LRFN1Q9P244 RN7SL752P-201ENST00000463779 287 ntBASIC14.61□□□□□ -0.07
LRFN1Q9P244 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 AC134407.2-201ENST00000625089 1978 ntBASIC14.61□□□□□ -0.07
LRFN1Q9P244 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.61□□□□□ -0.07
LRFN1Q9P244 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRFN1Q9P244 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.6□□□□□ -0.07
LRFN1Q9P244 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LRFN1Q9P244 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 AL118508.1-201ENST00000613502 2345 ntBASIC14.6□□□□□ -0.07
LRFN1Q9P244 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LRFN1Q9P244 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.6□□□□□ -0.07
LRFN1Q9P244 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRFN1Q9P244 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.6□□□□□ -0.07
LRFN1Q9P244 AC011495.1-201ENST00000498085 584 ntBASIC14.6□□□□□ -0.07
LRFN1Q9P244 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.6□□□□□ -0.07
LRFN1Q9P244 AC123567.1-201ENST00000548294 1261 ntBASIC14.6□□□□□ -0.07
LRFN1Q9P244 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms