Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AC087499.6-201ENST00000411576 835 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 COX5BP8-201ENST00000416911 349 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AC136604.1-201ENST00000418535 575 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 KRT18P64-201ENST00000434946 1219 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 GAPDHP21-201ENST00000450301 1010 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 TIMM17BP1-201ENST00000545713 516 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AC008494.3-201ENST00000606615 944 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AL391069.4-201ENST00000609583 481 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AP005117.1-202ENST00000581724 1908 ntBASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20BQ9P0W2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC011477.6-201ENST00000604980 1927 ntBASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC098850.1-201ENST00000419919 790 ntBASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 NME2P1-201ENST00000426182 414 ntBASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC239800.4-201ENST00000603712 296 ntBASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AC099568.2-201ENST00000609194 695 ntBASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20BQ9P0W2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 MEP1AP4-201ENST00000423244 1087 ntBASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 AC007431.3-201ENST00000623221 587 ntBASIC19.29■□□□□ 0.68
HMG20BQ9P0W2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms