Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC023141.5-201ENST00000458585 616 ntBASIC15.22■□□□□ 0.03
BRF2Q9HAW0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 AC097359.3-201ENST00000603982 1210 ntBASIC15.22■□□□□ 0.03
BRF2Q9HAW0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 AC127383.1-201ENST00000444697 1800 ntBASIC15.22■□□□□ 0.03
BRF2Q9HAW0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRF2Q9HAW0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 AC211486.1-202ENST00000416371 468 ntBASIC15.21■□□□□ 0.03
BRF2Q9HAW0 AL645939.2-201ENST00000427340 991 ntBASIC15.21■□□□□ 0.03
BRF2Q9HAW0 AC211476.1-201ENST00000503899 468 ntBASIC15.21■□□□□ 0.03
BRF2Q9HAW0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 AC026150.2-201ENST00000564693 1156 ntBASIC15.21■□□□□ 0.03
BRF2Q9HAW0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRF2Q9HAW0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.21■□□□□ 0.02
BRF2Q9HAW0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.21■□□□□ 0.02
BRF2Q9HAW0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
BRF2Q9HAW0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BRF2Q9HAW0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BRF2Q9HAW0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 AC023157.3-201ENST00000619086 2088 ntBASIC15.2■□□□□ 0.02
BRF2Q9HAW0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 AZGP1P1-201ENST00000411909 902 ntBASIC15.2■□□□□ 0.02
BRF2Q9HAW0 AC254562.1-201ENST00000417586 456 ntBASIC15.2■□□□□ 0.02
BRF2Q9HAW0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 AC003101.2-201ENST00000612557 442 ntBASIC15.2■□□□□ 0.02
BRF2Q9HAW0 AP001059.3-201ENST00000619053 235 ntBASIC15.2■□□□□ 0.02
BRF2Q9HAW0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRF2Q9HAW0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms