Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 AC092506.1-202ENST00000401022 528 ntBASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 AP003108.4-201ENST00000623917 878 ntBASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 AC139749.1-202ENST00000617529 3139 ntBASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC23.98■■□□□ 1.43
SCAF1Q9H7N4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 AC109462.3-201ENST00000573934 613 ntBASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC23.97■■□□□ 1.43
SCAF1Q9H7N4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 RHBDF1P1-201ENST00000427504 1941 ntBASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 ANKRD19P-201ENST00000338192 862 ntBASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 AL353779.1-201ENST00000434793 351 ntBASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 AC011495.1-201ENST00000498085 584 ntBASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 RN7SL219P-201ENST00000582872 296 ntBASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 BNIP3P35-201ENST00000604530 490 ntBASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 AC068620.4-201ENST00000636730 1182 ntBASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCAF1Q9H7N4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SCAF1Q9H7N4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SCAF1Q9H7N4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SCAF1Q9H7N4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SCAF1Q9H7N4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SCAF1Q9H7N4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.43
SCAF1Q9H7N4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC23.95■■□□□ 1.43
SCAF1Q9H7N4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SCAF1Q9H7N4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms