Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
PCDH11XQ9BZA7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH11XQ9BZA7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 AP006547.1-201ENST00000563435 692 ntBASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 MIR4313-201ENST00000580760 101 ntBASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH11XQ9BZA7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 KLF2P2-201ENST00000416807 1039 ntBASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 HOMER2P2-201ENST00000451621 847 ntBASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 AC091804.1-201ENST00000486888 567 ntBASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 RPSAP36-202ENST00000494591 1261 ntBASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms