Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC144831.1-201ENST00000573312 2656 ntBASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 MED15P5-201ENST00000423150 992 ntBASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AC027601.4-201ENST00000611259 610 ntBASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AL513190.1-201ENST00000621254 727 ntBASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHRDL1Q9BU40 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AC092474.2-201ENST00000424288 719 ntBASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 KRT18P3-201ENST00000451602 1288 ntBASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 RNA5SP416-201ENST00000516838 111 ntBASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AC092865.6-201ENST00000642101 219 ntBASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.73□□□□□ -0.37
CHRDL1Q9BU40 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms