Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 C18orf15-201ENST00000623680 2534 ntBASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC074386.1-202ENST00000463561 864 ntBASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC112191.1-201ENST00000523689 701 ntBASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC145285.3-201ENST00000564603 959 ntBASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 BNIP3P1-202ENST00000550043 1585 ntBASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 REXO1L1P-202ENST00000608646 1974 ntBASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SHANK2-AS3Q9BTD1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL161772.1-201ENST00000610494 4412 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC004987.2-201ENST00000395959 1148 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 PDPK2P-202ENST00000562415 1191 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 RARRES2P8-201ENST00000566335 367 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL138918.1-201ENST00000568306 659 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AP002472.1-201ENST00000577490 586 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 SLC25A6P4-201ENST00000586535 553 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms