Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 AC004870.1-201ENST00000315132 882 ntBASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HDHD3Q9BSH5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 KRT19P2-202ENST00000557173 1012 ntBASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDHD3Q9BSH5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms