Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.14□□□□□ -0.47
VGLL1Q99990 AC011477.6-201ENST00000604980 1927 ntBASIC12.14□□□□□ -0.47
VGLL1Q99990 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.14□□□□□ -0.47
VGLL1Q99990 VN2R19P-201ENST00000442399 1052 ntBASIC12.14□□□□□ -0.47
VGLL1Q99990 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
VGLL1Q99990 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.14□□□□□ -0.47
VGLL1Q99990 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 AL365330.1-201ENST00000607459 531 ntBASIC12.14□□□□□ -0.47
VGLL1Q99990 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.14□□□□□ -0.47
VGLL1Q99990 AC138035.3-201ENST00000622706 2791 ntBASIC12.14□□□□□ -0.47
VGLL1Q99990 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.14□□□□□ -0.47
VGLL1Q99990 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.14□□□□□ -0.47
VGLL1Q99990 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
VGLL1Q99990 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
VGLL1Q99990 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VGLL1Q99990 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VGLL1Q99990 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 IGLL3P-201ENST00000412472 434 ntBASIC12.13□□□□□ -0.47
VGLL1Q99990 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.13□□□□□ -0.47
VGLL1Q99990 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.13□□□□□ -0.47
VGLL1Q99990 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.13□□□□□ -0.47
VGLL1Q99990 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.13□□□□□ -0.47
VGLL1Q99990 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 AL009183.1-201ENST00000603760 355 ntBASIC12.13□□□□□ -0.47
VGLL1Q99990 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 AL078644.1-201ENST00000609881 752 ntBASIC12.13□□□□□ -0.47
VGLL1Q99990 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.13□□□□□ -0.47
VGLL1Q99990 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms