Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 LINC01225-203ENST00000563550 1244 ntBASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC073389.1-201ENST00000595595 795 ntBASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC139530.3-201ENST00000620344 690 ntBASIC15.12■□□□□ 0.01
COL21A1Q96P44 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 UXT-AS1-201ENST00000590504 1525 ntBASIC15.12■□□□□ 0.01
COL21A1Q96P44 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COL21A1Q96P44 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COL21A1Q96P44 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AC008677.1-201ENST00000519230 1561 ntBASIC15.11■□□□□ 0.01
COL21A1Q96P44 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 HAUS4P1-201ENST00000406739 1145 ntBASIC15.11■□□□□ 0.01
COL21A1Q96P44 RPS8P6-201ENST00000426177 609 ntBASIC15.11■□□□□ 0.01
COL21A1Q96P44 CNN2P11-201ENST00000429351 262 ntBASIC15.11■□□□□ 0.01
COL21A1Q96P44 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AL596442.2-201ENST00000610240 980 ntBASIC15.11■□□□□ 0.01
COL21A1Q96P44 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
COL21A1Q96P44 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.11■□□□□ 0.01
COL21A1Q96P44 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.1■□□□□ 0.01
COL21A1Q96P44 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL21A1Q96P44 DNAJB3-202ENST00000449667 1266 ntBASIC15.1■□□□□ 0.01
COL21A1Q96P44 AC069335.1-201ENST00000489972 472 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms