Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 AC005237.2-201ENST00000434368 219 ntBASIC16.2■□□□□ 0.18
RTP4Q96DX8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 AC023141.5-201ENST00000458585 616 ntBASIC16.2■□□□□ 0.18
RTP4Q96DX8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 HLA-J-203ENST00000494367 1087 ntBASIC16.2■□□□□ 0.18
RTP4Q96DX8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 AL607033.1-201ENST00000623900 1599 ntBASIC16.2■□□□□ 0.18
RTP4Q96DX8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 FO393414.2-201ENST00000405153 598 ntBASIC16.19■□□□□ 0.18
RTP4Q96DX8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 KRT18P32-201ENST00000424695 1287 ntBASIC16.19■□□□□ 0.18
RTP4Q96DX8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 AL133215.2-201ENST00000609242 977 ntBASIC16.19■□□□□ 0.18
RTP4Q96DX8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTP4Q96DX8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RTP4Q96DX8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 SPDYE14P-201ENST00000442619 822 ntBASIC16.18■□□□□ 0.18
RTP4Q96DX8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.18■□□□□ 0.18
RTP4Q96DX8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTP4Q96DX8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms