Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 RRP7BP-205ENST00000566851 833 ntBASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ECHDC3Q96DC8 AC138969.3-201ENST00000546612 1459 ntBASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AC138932.2-201ENST00000548268 1459 ntBASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AC126755.4-201ENST00000549796 1459 ntBASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AC022188.1-201ENST00000620960 1664 ntBASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AL035633.1-201ENST00000406139 838 ntBASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ECHDC3Q96DC8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.83■□□□□ 0.13
ECHDC3Q96DC8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ECHDC3Q96DC8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ECHDC3Q96DC8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.83■□□□□ 0.13
ECHDC3Q96DC8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ECHDC3Q96DC8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ECHDC3Q96DC8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
ECHDC3Q96DC8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 AL662799.1-202ENST00000614205 422 ntBASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ECHDC3Q96DC8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms