Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 FAM197Y8-203ENST00000450145 560 ntBASIC14.19□□□□□ -0.14
RFT1Q96AA3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 EMBP1-201ENST00000458200 901 ntBASIC14.19□□□□□ -0.14
RFT1Q96AA3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 AC012640.2-201ENST00000561606 901 ntBASIC14.19□□□□□ -0.14
RFT1Q96AA3 AL356488.2-201ENST00000602755 427 ntBASIC14.19□□□□□ -0.14
RFT1Q96AA3 AC008667.4-201ENST00000607370 168 ntBASIC14.19□□□□□ -0.14
RFT1Q96AA3 AC008735.5-201ENST00000623544 497 ntBASIC14.19□□□□□ -0.14
RFT1Q96AA3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.19□□□□□ -0.14
RFT1Q96AA3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFT1Q96AA3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 AC007191.1-201ENST00000623179 2995 ntBASIC14.18□□□□□ -0.14
RFT1Q96AA3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 HCG4-201ENST00000418983 998 ntBASIC14.18□□□□□ -0.14
RFT1Q96AA3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 HNRNPDP1-201ENST00000439535 754 ntBASIC14.18□□□□□ -0.14
RFT1Q96AA3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 IGHV3-65-201ENST00000523210 341 ntBASIC14.18□□□□□ -0.14
RFT1Q96AA3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 AC105339.3-201ENST00000560043 636 ntBASIC14.18□□□□□ -0.14
RFT1Q96AA3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.18□□□□□ -0.14
RFT1Q96AA3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFT1Q96AA3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.17□□□□□ -0.14
RFT1Q96AA3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFT1Q96AA3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms