Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.33□□□□□ -0.11
CPNE4Q96A23 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.33□□□□□ -0.11
CPNE4Q96A23 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.33□□□□□ -0.11
CPNE4Q96A23 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE4Q96A23 AC011477.6-201ENST00000604980 1927 ntBASIC14.33□□□□□ -0.11
CPNE4Q96A23 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 INGX-202ENST00000489074 768 ntBASIC14.33□□□□□ -0.12
CPNE4Q96A23 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 AL033527.5-202ENST00000641632 1098 ntBASIC14.33□□□□□ -0.12
CPNE4Q96A23 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CPNE4Q96A23 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.33□□□□□ -0.12
CPNE4Q96A23 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE4Q96A23 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.32□□□□□ -0.12
CPNE4Q96A23 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 AJ011932.1-201ENST00000621707 465 ntBASIC14.32□□□□□ -0.12
CPNE4Q96A23 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 TSPY26P-202ENST00000565928 3884 ntBASIC14.32□□□□□ -0.12
CPNE4Q96A23 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.32□□□□□ -0.12
CPNE4Q96A23 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE4Q96A23 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.31□□□□□ -0.12
CPNE4Q96A23 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms