Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.54■□□□□ 0.08
NCLNQ969V3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 MIR3909-201ENST00000579518 119 ntBASIC15.54■□□□□ 0.08
NCLNQ969V3 AL161645.1-201ENST00000622716 1255 ntBASIC15.54■□□□□ 0.08
NCLNQ969V3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NCLNQ969V3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NCLNQ969V3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.54■□□□□ 0.08
NCLNQ969V3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCLNQ969V3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.53■□□□□ 0.08
NCLNQ969V3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NCLNQ969V3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NCLNQ969V3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 AL355306.1-201ENST00000415580 579 ntBASIC15.53■□□□□ 0.08
NCLNQ969V3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
NCLNQ969V3 AL671277.1-201ENST00000429656 993 ntBASIC15.53■□□□□ 0.08
NCLNQ969V3 AP006288.1-201ENST00000446065 395 ntBASIC15.53■□□□□ 0.08
NCLNQ969V3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.53■□□□□ 0.08
NCLNQ969V3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.53■□□□□ 0.08
NCLNQ969V3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
NCLNQ969V3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NCLNQ969V3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 AL596442.2-201ENST00000610240 980 ntBASIC15.53■□□□□ 0.08
NCLNQ969V3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 AC079781.4-201ENST00000641908 219 ntBASIC15.53■□□□□ 0.08
NCLNQ969V3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.53■□□□□ 0.08
NCLNQ969V3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCLNQ969V3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 AC112504.1-201ENST00000623415 1841 ntBASIC15.52■□□□□ 0.08
NCLNQ969V3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.52■□□□□ 0.08
NCLNQ969V3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NCLNQ969V3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCLNQ969V3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms