Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.72□□□□□ -0.05
HPS1Q92902 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HPS1Q92902 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HPS1Q92902 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.71□□□□□ -0.05
HPS1Q92902 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.71□□□□□ -0.05
HPS1Q92902 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HPS1Q92902 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HPS1Q92902 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 RNA5SP415-201ENST00000517246 115 ntBASIC14.71□□□□□ -0.05
HPS1Q92902 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.71□□□□□ -0.05
HPS1Q92902 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.71□□□□□ -0.05
HPS1Q92902 MIR1199-201ENST00000621445 119 ntBASIC14.71□□□□□ -0.05
HPS1Q92902 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.71□□□□□ -0.05
HPS1Q92902 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HPS1Q92902 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.71□□□□□ -0.05
HPS1Q92902 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HPS1Q92902 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HPS1Q92902 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HPS1Q92902 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HPS1Q92902 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
HPS1Q92902 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
HPS1Q92902 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HPS1Q92902 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
HPS1Q92902 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HPS1Q92902 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HPS1Q92902 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.71□□□□□ -0.06
HPS1Q92902 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
HPS1Q92902 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.7□□□□□ -0.06
HPS1Q92902 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HPS1Q92902 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.7□□□□□ -0.06
HPS1Q92902 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
HPS1Q92902 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.7□□□□□ -0.06
HPS1Q92902 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.7□□□□□ -0.06
HPS1Q92902 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 AC124947.2-201ENST00000547118 1133 ntBASIC14.7□□□□□ -0.06
HPS1Q92902 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 AC034105.1-201ENST00000563488 319 ntBASIC14.7□□□□□ -0.06
HPS1Q92902 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.7□□□□□ -0.06
HPS1Q92902 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.7□□□□□ -0.06
HPS1Q92902 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HPS1Q92902 AC087386.2-201ENST00000623212 4637 ntBASIC14.7□□□□□ -0.06
HPS1Q92902 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HPS1Q92902 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.7□□□□□ -0.06
HPS1Q92902 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 AC005912.2-201ENST00000619492 2400 ntBASIC14.7□□□□□ -0.06
HPS1Q92902 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.7□□□□□ -0.06
HPS1Q92902 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms