Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 MED15P5-201ENST00000423150 992 ntBASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 KRT18P2-201ENST00000447938 1258 ntBASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 FAM197Y3-203ENST00000618346 717 ntBASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 AC004877.2-201ENST00000623941 599 ntBASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 AL009178.2-201ENST00000597278 2719 ntBASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTN4IP1Q8WWV3 AC025580.3-201ENST00000617932 1424 ntBASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 KRT19P2-202ENST00000557173 1012 ntBASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 AC140113.2-201ENST00000604370 208 ntBASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RTN4IP1Q8WWV3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms