Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AP001350.2-201ENST00000625104 1094 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 TP73-AS1-210ENST00000637775 1455 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 SLC22A20-204ENST00000530038 1673 ntBASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMIM11BQ8TCY0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 AC005252.3-201ENST00000623855 2258 ntBASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMIM11BQ8TCY0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 INTS4P1-203ENST00000641008 3683 ntBASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 USP36-216ENST00000589424 970 ntTSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 REXO1L3P-201ENST00000622202 1288 ntBASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SIGLEC16-201ENST00000599858 1437 ntBASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMIM11BQ8TCY0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM11BQ8TCY0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM11BQ8TCY0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMIM11BQ8TCY0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms