Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
FNDC9Q8TBE3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 MIR600HG-201ENST00000449175 5984 ntBASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 AC236430.1-201ENST00000402231 743 ntBASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 SPDYE17-201ENST00000412399 783 ntBASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 SERBP1P3-201ENST00000459980 809 ntBASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 RN7SL618P-201ENST00000477850 296 ntBASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 AC007950.2-201ENST00000615045 2347 ntBASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FNDC9Q8TBE3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 AL691432.1-201ENST00000596308 1422 ntBASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 MIR661-201ENST00000384842 89 ntBASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 AC002472.2-201ENST00000442739 958 ntBASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 AC009477.1-201ENST00000452936 217 ntBASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 AL512361.1-201ENST00000554200 418 ntBASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 RN7SL204P-201ENST00000582831 262 ntBASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms