Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH19Q8TAB3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 AL035456.1-201ENST00000456064 1369 ntBASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 MTND6P24-201ENST00000440466 518 ntBASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 Z92544.3-201ENST00000624747 417 ntBASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 AC144831.1-201ENST00000573312 2656 ntBASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDH19Q8TAB3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 SPDYE7P-202ENST00000420373 878 ntBASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 AC069262.1-201ENST00000539058 672 ntBASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDH19Q8TAB3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms