Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC009093.7-201ENST00000623853 1223 ntBASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AC092384.3-202ENST00000564646 2873 ntBASIC14.91□□□□□ -0.02
NUP43Q8NFH3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AC020658.6-201ENST00000623564 1870 ntBASIC14.91□□□□□ -0.02
NUP43Q8NFH3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 CNN2P11-201ENST00000429351 262 ntBASIC14.91□□□□□ -0.02
NUP43Q8NFH3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 SPDYE14P-201ENST00000442619 822 ntBASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 PHKG1P2-201ENST00000457537 863 ntBASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AC092127.1-201ENST00000567093 3455 ntBASIC14.91□□□□□ -0.02
NUP43Q8NFH3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.91□□□□□ -0.02
NUP43Q8NFH3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms