Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 NEU3-207ENST00000534628 746 ntTSL 2 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 CR383656.3-201ENST00000551315 183 ntBASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 AC008805.1-201ENST00000590892 364 ntBASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 AL008718.2-201ENST00000609206 1313 ntBASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC21.34■■□□□ 1.01
LTBP4Q8N2S1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 FAM58BP-201ENST00000439056 645 ntBASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 PGAM1P12-201ENST00000505622 748 ntBASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 ELP5-212ENST00000574255 671 ntTSL 2 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 AL158070.2-201ENST00000623713 1621 ntBASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
LTBP4Q8N2S1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1
LTBP4Q8N2S1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.33■■□□□ 1
LTBP4Q8N2S1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.33■■□□□ 1
LTBP4Q8N2S1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.33■■□□□ 1
LTBP4Q8N2S1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LTBP4Q8N2S1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC21.33■■□□□ 1
LTBP4Q8N2S1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.33■■□□□ 1
LTBP4Q8N2S1 AC106047.2-201ENST00000511723 743 ntBASIC21.33■■□□□ 1
LTBP4Q8N2S1 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC21.33■■□□□ 1
LTBP4Q8N2S1 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC21.33■■□□□ 1
LTBP4Q8N2S1 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC21.33■■□□□ 1
LTBP4Q8N2S1 DUX4L46-201ENST00000566845 751 ntBASIC21.33■■□□□ 1
LTBP4Q8N2S1 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
LTBP4Q8N2S1 MIR3180-2-201ENST00000581748 88 ntBASIC21.33■■□□□ 1
LTBP4Q8N2S1 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
LTBP4Q8N2S1 HMGB1P24-201ENST00000611897 328 ntBASIC21.33■■□□□ 1
LTBP4Q8N2S1 AC010503.4-201ENST00000615487 688 ntBASIC21.33■■□□□ 1
LTBP4Q8N2S1 AL603764.1-201ENST00000636452 321 ntBASIC21.33■■□□□ 1
LTBP4Q8N2S1 Z98259.2-201ENST00000641583 609 ntBASIC21.33■■□□□ 1
LTBP4Q8N2S1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LTBP4Q8N2S1 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC21.33■■□□□ 1
LTBP4Q8N2S1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTBP4Q8N2S1 TNXA-203ENST00000507684 2038 ntBASIC21.32■■□□□ 1
LTBP4Q8N2S1 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTBP4Q8N2S1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LTBP4Q8N2S1 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTBP4Q8N2S1 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC21.32■■□□□ 1
LTBP4Q8N2S1 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 AL354861.1-201ENST00000445213 355 ntBASIC21.32■■□□□ 1
LTBP4Q8N2S1 AL135901.1-201ENST00000451812 333 ntBASIC21.32■■□□□ 1
LTBP4Q8N2S1 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 RPS5-204ENST00000598098 536 ntTSL 2 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 AC006548.2-201ENST00000605217 529 ntBASIC21.32■■□□□ 1
LTBP4Q8N2S1 CR392039.1-201ENST00000623217 204 ntBASIC21.32■■□□□ 1
LTBP4Q8N2S1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTBP4Q8N2S1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LTBP4Q8N2S1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LTBP4Q8N2S1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LTBP4Q8N2S1 BICD1-207ENST00000551848 1962 ntBASIC21.31■■□□□ 1
LTBP4Q8N2S1 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC21.31■■□□□ 1
LTBP4Q8N2S1 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LTBP4Q8N2S1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms