Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 SPDYE17-201ENST00000412399 783 ntBASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 AC132872.4-202ENST00000622924 2756 ntBASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.56□□□□□ -0.08
ZNF440Q8IYI8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 AC087481.3-201ENST00000602886 1894 ntBASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 CNN2P11-201ENST00000429351 262 ntBASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 AL512356.2-201ENST00000546955 174 ntBASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 SNHG9-202ENST00000564014 471 ntBASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.55□□□□□ -0.08
ZNF440Q8IYI8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 AP003680.1-201ENST00000598970 3660 ntBASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 AL139384.1-201ENST00000612143 3047 ntBASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF440Q8IYI8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms