Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 AL589702.1-201ENST00000641229 1509 ntBASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NUDCD3Q8IVD9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 CICP23-201ENST00000605013 2741 ntBASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 SNX18-202ENST00000343017 3140 ntBASIC15.88■□□□□ 0.13
NUDCD3Q8IVD9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 AC007292.2-201ENST00000593524 1812 ntBASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 AP002414.3-201ENST00000589352 1468 ntBASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 RNPS1P1-201ENST00000507437 918 ntBASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 AC023908.3-201ENST00000564211 3047 ntBASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NUDCD3Q8IVD9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms