Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RRP7BP-205ENST00000566851 833 ntBASIC16.91■□□□□ 0.3
RNF135Q8IUD6 MIR3615-201ENST00000581999 87 ntBASIC16.91■□□□□ 0.3
RNF135Q8IUD6 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.91■□□□□ 0.3
RNF135Q8IUD6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 AC244517.3-201ENST00000616254 1235 ntBASIC16.91■□□□□ 0.3
RNF135Q8IUD6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF135Q8IUD6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 HLA-A-202ENST00000376806 1854 ntBASIC16.9■□□□□ 0.3
RNF135Q8IUD6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 AC008741.2-201ENST00000612792 3115 ntBASIC16.9■□□□□ 0.3
RNF135Q8IUD6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 KRT8P39-201ENST00000396270 1433 ntBASIC16.9■□□□□ 0.3
RNF135Q8IUD6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 RN7SL190P-201ENST00000582519 257 ntBASIC16.9■□□□□ 0.3
RNF135Q8IUD6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF135Q8IUD6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RNF135Q8IUD6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.89■□□□□ 0.3
RNF135Q8IUD6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.89■□□□□ 0.3
RNF135Q8IUD6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.89■□□□□ 0.3
RNF135Q8IUD6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RNF135Q8IUD6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 CLK3P2-201ENST00000427566 1453 ntBASIC16.89■□□□□ 0.29
RNF135Q8IUD6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 CSF2RBP1-201ENST00000447905 391 ntBASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 SLC25A47P1-201ENST00000531577 414 ntBASIC16.89■□□□□ 0.29
RNF135Q8IUD6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 RHOQP1-201ENST00000555758 579 ntBASIC16.89■□□□□ 0.29
RNF135Q8IUD6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.89■□□□□ 0.29
RNF135Q8IUD6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF135Q8IUD6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF135Q8IUD6 AC008894.3-201ENST00000624324 3103 ntBASIC16.88■□□□□ 0.29
RNF135Q8IUD6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms