Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.12□□□□□ -0.31
CSMD2Q7Z408 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 AL139008.1-201ENST00000437894 228 ntBASIC13.12□□□□□ -0.31
CSMD2Q7Z408 AL133466.1-201ENST00000447582 150 ntBASIC13.12□□□□□ -0.31
CSMD2Q7Z408 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 AC080080.1-201ENST00000625121 2420 ntBASIC13.12□□□□□ -0.31
CSMD2Q7Z408 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 GAPDHP40-201ENST00000505218 1006 ntBASIC13.12□□□□□ -0.31
CSMD2Q7Z408 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 DGAT2L7P-201ENST00000602462 744 ntBASIC13.12□□□□□ -0.31
CSMD2Q7Z408 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD2Q7Z408 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 MIR4649-201ENST00000582839 64 ntBASIC13.11□□□□□ -0.31
CSMD2Q7Z408 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 AC138894.2-201ENST00000602838 371 ntBASIC13.11□□□□□ -0.31
CSMD2Q7Z408 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 AC006335.1-201ENST00000445200 547 ntBASIC13.11□□□□□ -0.31
CSMD2Q7Z408 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 AC242376.1-201ENST00000559033 726 ntBASIC13.11□□□□□ -0.31
CSMD2Q7Z408 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD2Q7Z408 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AL354877.1-201ENST00000424412 413 ntBASIC13.1□□□□□ -0.31
CSMD2Q7Z408 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 IGHV3-37-201ENST00000518544 340 ntBASIC13.1□□□□□ -0.31
CSMD2Q7Z408 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AL022344.2-201ENST00000568976 968 ntBASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 AL805961.1-201ENST00000642026 753 ntBASIC13.1□□□□□ -0.31
CSMD2Q7Z408 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD2Q7Z408 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms