Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 AC006480.2-201ENST00000609770 1337 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 ACTG1P2-201ENST00000415776 1125 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 ACTG1P11-201ENST00000425411 1125 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 MAGEA5-201ENST00000446757 942 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 HOMER2P2-201ENST00000451621 847 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 RPSAP36-202ENST00000494591 1261 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 AC073352.2-201ENST00000609385 439 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 KRT18P43-201ENST00000469825 1281 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 AC079336.7-201ENST00000623428 1078 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 INE2-201ENST00000630399 1874 ntBASIC12.99□□□□□ -0.33
VPS13CQ709C8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.99□□□□□ -0.33
VPS13CQ709C8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VPS13CQ709C8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 AC073413.1-201ENST00000603927 732 ntBASIC12.98□□□□□ -0.33
VPS13CQ709C8 AC022748.3-201ENST00000621828 275 ntBASIC12.98□□□□□ -0.33
VPS13CQ709C8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 AC010491.1-201ENST00000563101 2797 ntBASIC12.98□□□□□ -0.33
VPS13CQ709C8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 EEF1DP6-201ENST00000449232 372 ntBASIC12.98□□□□□ -0.33
VPS13CQ709C8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VPS13CQ709C8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.98□□□□□ -0.33
VPS13CQ709C8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.97□□□□□ -0.33
VPS13CQ709C8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VPS13CQ709C8 PRKXP1-201ENST00000561423 1122 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms