Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC092865.5-201ENST00000545435 363 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 BANF1P1-201ENST00000553684 263 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AC134407.2-201ENST00000625089 1978 ntBASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NHLRC1Q6VVB1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 AC013268.4-201ENST00000637413 2228 ntBASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 AC004835.2-201ENST00000603762 682 ntBASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 AC009093.7-201ENST00000623853 1223 ntBASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 AC134684.3-201ENST00000641758 218 ntBASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NHLRC1Q6VVB1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 AC004987.2-201ENST00000395959 1148 ntBASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 SPDYE14P-201ENST00000442619 822 ntBASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 EEF1DP4-201ENST00000446006 880 ntBASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.34□□□□□ -0.11
NHLRC1Q6VVB1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms