Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC098614.1-201ENST00000368528 745 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 HAUS4P1-201ENST00000406739 1145 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AL589987.1-201ENST00000453380 819 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 MEIS3P1-201ENST00000495167 958 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC023310.3-201ENST00000557027 670 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC100756.1-201ENST00000562736 682 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 RRP7BP-205ENST00000566851 833 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC138749.3-201ENST00000567691 622 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 AC116165.1-201ENST00000611806 668 ntBASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H3F3CQ6NXT2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 TIMM17BP1-201ENST00000545713 516 ntBASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H3F3CQ6NXT2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H3F3CQ6NXT2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms