Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AF238378.1-201ENST00000526806 358 ntBASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 LINC01711-201ENST00000598340 967 ntBASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AC097376.2-205ENST00000610159 5334 ntBASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 AC073439.1-201ENST00000624121 1774 ntBASIC10.93□□□□□ -0.66
LINC00242Q5T6M2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 INIP-202ENST00000374236 874 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 GPX1P2-201ENST00000429271 606 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC073648.2-201ENST00000510116 352 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC109635.5-201ENST00000533593 962 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC105339.3-201ENST00000560043 636 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC002347.1-201ENST00000569543 541 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 CLEC4GP1-201ENST00000596555 870 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AL078644.1-201ENST00000609881 752 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 AC007686.3-201ENST00000619017 3487 ntBASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC00242Q5T6M2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms